Index

A

add_new_dataset_to_library() (pyklip.rdi.PSFLibrary method) airyfit2d() (in module pyklip.fakes) align_and_scale() (in module pyklip.klip) aligned_center (pyklip.rdi.PSFLibrary attribute) alloc_fmout() (pyklip.fmlib.diskfm.DiskFM method) (pyklip.fmlib.extractSpec.ExtractSpec method) (pyklip.fmlib.fmpsf.FMPlanetPSF method) (pyklip.fmlib.matchedFilter.MatchedFilter method) (pyklip.fmlib.nofm.NoFM method)

alloc_interm() (pyklip.fmlib.nofm.NoFM method) alloc_output() (pyklip.fmlib.nofm.NoFM method) alloc_perturbmag() (pyklip.fmlib.fmpsf.FMPlanetPSF method) (pyklip.fmlib.nofm.NoFM method) as2pix() (in module pyklip.instruments.GPI)

B

bad_sat_spots (pyklip.instruments.CHARIS.CHARISData attribute) (pyklip.instruments.GPI.GPIData attribute) band (pyklip.instruments.GPI.GPIData attribute) (pyklip.instruments.MagAO.MagAOData attribute) (pyklip.instruments.NIRC2.NIRC2Data attribute)

bands (pyklip.instruments.GPI.GPIData attribute) (pyklip.instruments.MagAO.MagAOData attribute) (pyklip.instruments.NIRC2.NIRC2Data attribute) best_fit_and_residuals() (pyklip.fitpsf.FitPSF method) bestfit (pyklip.fitpsf.ParamRange attribute)

C

calc_center() (in module pyklip.instruments.GPI) calc_center_least_squares() (in module pyklip.instruments.GPI) calc_scaling() (in module pyklip.klip) calc_starflux() (in module pyklip.instruments.NIRC2) calculate_cc() (in module pyklip.kpp.metrics.crossCorr) calculate_fm() (in module pyklip.fm) calculate_fm_opti() (in module pyklip.fmlib.matchedFilter) calculate_fm_singleNumbasis() (in module pyklip.fm) calculate_matchedfilter() (in module pyklip.kpp.metrics.matchedfilter) calculate_matchedfilter_star() (in module pyklip.kpp.metrics.matchedfilter) calculate_validity() (in module pyklip.fm) calibrate_data() (pyklip.instruments.NIRC2.NIRC2Data method) calibrate_output() (pyklip.instruments.CHARIS.CHARISData method), [1] (pyklip.instruments.GPI.GPIData method), [1] (pyklip.instruments.Instrument.Data method), [1] (pyklip.instruments.Instrument.GenericData method) (pyklip.instruments.MagAO.MagAOData method), [1] (pyklip.instruments.NIRC2.NIRC2Data method), [1] (pyklip.instruments.SPHERE.Ifs method) (pyklip.instruments.SPHERE.Irdis method) (pyklip.instruments.osiris.Ifs method) calibrate_star_spectrum() (in module pyklip.spectra_management) cam (pyklip.instruments.NIRC2.NIRC2Data attribute) cameras (pyklip.instruments.NIRC2.NIRC2Data attribute) casdi_residual() (in module pyklip.instruments.osiris) casdi_residual_star() (in module pyklip.instruments.osiris) centers (pyklip.instruments.CHARIS.CHARISData attribute), [1] (pyklip.instruments.GPI.GPIData attribute), [1] (pyklip.instruments.Instrument.Data attribute), [1] (pyklip.instruments.Instrument.GenericData attribute), [1] (pyklip.instruments.MagAO.MagAOData attribute), [1] (pyklip.instruments.NIRC2.NIRC2Data attribute), [1] (pyklip.instruments.SPHERE.Ifs attribute), [1] (pyklip.instruments.SPHERE.Irdis attribute), [1] (pyklip.instruments.osiris.Ifs attribute), [1]

centralwave (pyklip.instruments.CHARIS.CHARISData attribute) (pyklip.instruments.GPI.GPIData attribute) (pyklip.instruments.MagAO.MagAOData attribute) (pyklip.instruments.NIRC2.NIRC2Data attribute) centroid_image() (in module pyklip.instruments.P1640_support.P1640utils) CHARISData (class in pyklip.instruments.CHARIS) clean_bad_pixels() (in module pyklip.instruments.P1640_support.P1640utils) clean_bad_pixels_cube() (in module pyklip.instruments.P1640_support.P1640utils) cleanup_fmout() (pyklip.fmlib.diskfm.DiskFM method) (pyklip.fmlib.extractSpec.ExtractSpec method) (pyklip.fmlib.fmpsf.FMPlanetPSF method) (pyklip.fmlib.nofm.NoFM method) collapse_data() (in module pyklip.klip) config (pyklip.instruments.GPI.GPIData attribute) (pyklip.instruments.MagAO.MagAOData attribute) (pyklip.instruments.NIRC2.NIRC2Data attribute) configfile (pyklip.instruments.GPI.GPIData attribute) (pyklip.instruments.MagAO.MagAOData attribute) (pyklip.instruments.NIRC2.NIRC2Data attribute) Consumer (class in pyklip.instruments.utils.global_centroid) contrast_scaling (pyklip.instruments.MagAO.MagAOData attribute) convert_pa_to_image_polar() (in module pyklip.fakes) convert_polar_to_image_pa() (in module pyklip.fakes) coronagraph_throughputs (pyklip.instruments.GPI.GPIData attribute) correlation (pyklip.rdi.PSFLibrary attribute) covar_params (pyklip.fitpsf.FitPSF attribute) (pyklip.fitpsf.FMAstrometry attribute) (pyklip.fitpsf.PlanetEvidence attribute) creator (pyklip.instruments.Instrument.Data attribute) (pyklip.instruments.NIRC2.NIRC2Data attribute)

D

daemon (pyklip.kpp.utils.multiproc.NoDaemonProcess attribute) Data (class in pyklip.instruments.Instrument) data_stamp (pyklip.fitpsf.FitPSF attribute) (pyklip.fitpsf.FMAstrometry attribute) (pyklip.fitpsf.PlanetEvidence attribute) dataset (pyklip.rdi.PSFLibrary attribute) Dec_offset (pyklip.fitpsf.FMAstrometry attribute) (pyklip.fitpsf.PlanetEvidence attribute)

define_annuli_bounds() (in module pyklip.klip) delta() (in module pyklip.covars) determine_mosaic_offsets_from_header() (in module pyklip.instruments.osiris) determine_mosaic_offsets_from_speckles() (in module pyklip.instruments.osiris) DiskFM (class in pyklip.fmlib.diskfm) dn_per_contrast (pyklip.instruments.CHARIS.CHARISData attribute) (pyklip.instruments.GPI.GPIData attribute)

E

error (pyklip.fitpsf.ParamRange attribute) error_2sided (pyklip.fitpsf.ParamRange attribute) estimate_movement() (in module pyklip.klip) exthdrs (pyklip.instruments.CHARIS.CHARISData attribute) (pyklip.instruments.GPI.GPIData attribute) (pyklip.instruments.MagAO.MagAOData attribute)

extract_planet_spectrum() (in module pyklip.spectra_management) ExtractSpec (class in pyklip.fmlib.extractSpec)

F

filenames (pyklip.instruments.CHARIS.CHARISData attribute), [1] (pyklip.instruments.GPI.GPIData attribute), [1] (pyklip.instruments.Instrument.Data attribute), [1] (pyklip.instruments.Instrument.GenericData attribute), [1] (pyklip.instruments.MagAO.MagAOData attribute) (pyklip.instruments.NIRC2.NIRC2Data attribute), [1] (pyklip.instruments.SPHERE.Ifs attribute), [1] (pyklip.instruments.SPHERE.Irdis attribute), [1] (pyklip.instruments.osiris.Ifs attribute), [1] filenums (pyklip.instruments.CHARIS.CHARISData attribute), [1] (pyklip.instruments.GPI.GPIData attribute), [1] (pyklip.instruments.Instrument.Data attribute), [1] (pyklip.instruments.Instrument.GenericData attribute), [1] (pyklip.instruments.MagAO.MagAOData attribute), [1] (pyklip.instruments.NIRC2.NIRC2Data attribute), [1] (pyklip.instruments.SPHERE.Ifs attribute), [1] (pyklip.instruments.SPHERE.Irdis attribute), [1] (pyklip.instruments.osiris.Ifs attribute), [1] find_bad_pix() (in module pyklip.instruments.P1640_support.P1640utils) find_id_nearest() (in module pyklip.fm) find_lower_nearest() (in module pyklip.spectra_management) find_nearest() (in module pyklip.spectra_management) find_upper_nearest() (in module pyklip.spectra_management) fit_astrometry() (pyklip.fitpsf.FMAstrometry method) fit_flux (pyklip.fitpsf.FitPSF attribute) fit_plots() (pyklip.fitpsf.PlanetEvidence method) fit_psf() (pyklip.fitpsf.FitPSF method) fit_stats() (pyklip.fitpsf.PlanetEvidence method) fit_x (pyklip.fitpsf.FitPSF attribute) fit_y (pyklip.fitpsf.FitPSF attribute) fitallrelcen() (in module pyklip.instruments.utils.global_centroid) fitcen() (in module pyklip.instruments.utils.global_centroid) fitcen_parallel() (in module pyklip.instruments.utils.global_centroid)

FitPSF (class in pyklip.fitpsf) fitrelcen() (in module pyklip.instruments.utils.global_centroid) flipx (pyklip.instruments.Instrument.Data attribute) (pyklip.instruments.MagAO.MagAOData attribute) (pyklip.instruments.SPHERE.Ifs attribute) (pyklip.instruments.SPHERE.Irdis attribute) (pyklip.instruments.osiris.Ifs attribute) flux_units (pyklip.instruments.CHARIS.CHARISData attribute) (pyklip.instruments.GPI.GPIData attribute) (pyklip.instruments.MagAO.MagAOData attribute) flux_zeropt (pyklip.instruments.CHARIS.CHARISData attribute) (pyklip.instruments.GPI.GPIData attribute) (pyklip.instruments.MagAO.MagAOData attribute) (pyklip.instruments.NIRC2.NIRC2Data attribute) fm_end_sector() (pyklip.fmlib.matchedFilter.MatchedFilter method) (pyklip.fmlib.nofm.NoFM method) fm_from_eigen() (pyklip.fmlib.diskfm.DiskFM method) (pyklip.fmlib.extractSpec.ExtractSpec method) (pyklip.fmlib.fmpsf.FMPlanetPSF method) (pyklip.fmlib.matchedFilter.MatchedFilter method) (pyklip.fmlib.nofm.NoFM method) fm_parallelized() (pyklip.fmlib.diskfm.DiskFM method) fm_residuals() (pyklip.fitpsf.PlanetEvidence method) fm_stamp (pyklip.fitpsf.FitPSF attribute) (pyklip.fitpsf.FMAstrometry attribute) (pyklip.fitpsf.PlanetEvidence attribute) FMAstrometry (class in pyklip.fitpsf) FMPlanetPSF (class in pyklip.fmlib.fmpsf) fpm (pyklip.instruments.NIRC2.NIRC2Data attribute) fpm_diam (pyklip.instruments.CHARIS.CHARISData attribute) (pyklip.instruments.GPI.GPIData attribute) (pyklip.instruments.NIRC2.NIRC2Data attribute) fpm_yx (pyklip.instruments.NIRC2.NIRC2Data attribute) fpms (pyklip.instruments.NIRC2.NIRC2Data attribute)

G

gauss2d() (in module pyklip.fakes) (in module pyklip.kpp.utils.mathfunc) gaussfit2d() (in module pyklip.fakes) gaussfit2dLSQ() (in module pyklip.fakes) generate_data_stamp() (pyklip.fitpsf.FitPSF method) (pyklip.fitpsf.FMAstrometry method) generate_dataset_with_fakes() (in module pyklip.fakes) generate_fm_stamp() (pyklip.fitpsf.FitPSF method) (pyklip.fitpsf.FMAstrometry method) generate_host_star_psfs() (pyklip.instruments.CHARIS.CHARISData method) generate_model_sci() (pyklip.fmlib.matchedFilter.MatchedFilter method) generate_models() (pyklip.fmlib.extractSpec.ExtractSpec method) (pyklip.fmlib.fmpsf.FMPlanetPSF method) (pyklip.fmlib.matchedFilter.MatchedFilter method) generate_noise_maps() (in module pyklip.parallelized) generate_psf() (in module pyklip.instruments.CHARIS) (in module pyklip.instruments.GPI) generate_psf_cube() (pyklip.instruments.GPI.GPIData method) generate_psfs() (pyklip.instruments.CHARIS.CHARISData method) (pyklip.instruments.GPI.GPIData method) GenericData (class in pyklip.instruments.Instrument) get_cdf_model() (in module pyklip.kpp.stat.stat_utils) get_coeff_mathar() (in module pyklip.instruments.utils.nair) get_cube_stddev() (in module pyklip.kpp.stat.stat_utils) get_cube_xsection() (in module pyklip.instruments.P1640_support.P1640utils) get_encircled_energy_cube() (in module pyklip.instruments.P1640_support.P1640utils) get_encircled_energy_image() (in module pyklip.instruments.P1640_support.P1640utils) get_gpi_wavelength_sampling() (in module pyklip.instruments.GPI) get_image_PDF() (in module pyklip.kpp.stat.stat_utils) get_image_stat() (in module pyklip.kpp.stat.stat_utils)

get_image_stat_map() (in module pyklip.kpp.stat.stat_utils) get_image_stat_map_perPixMasking() (in module pyklip.kpp.stat.statPerPix_utils) get_image_stat_map_perPixMasking_threadTask() (in module pyklip.kpp.stat.statPerPix_utils) get_image_stat_map_perPixMasking_threadTask_star() (in module pyklip.kpp.stat.statPerPix_utils) get_image_stddev() (in module pyklip.kpp.stat.stat_utils) get_IOWA() (in module pyklip.kpp.utils.GPIimage) get_occ() (in module pyklip.kpp.utils.GPIimage) get_pa() (in module pyklip.instruments.NIRC2) get_pdf_model() (in module pyklip.kpp.stat.stat_utils) get_planet_spectrum() (in module pyklip.spectra_management) get_pos_known_objects() (in module pyklip.kpp.utils.oi) get_PSF_center() (in module pyklip.instruments.P1640_support.P1640utils) get_radial_psf() (pyklip.instruments.GPI.GPIData method) get_sats_satf() (in module pyklip.instruments.utils.global_centroid) get_specType() (in module pyklip.spectra_management) get_spot_files() (in module pyklip.instruments.P1640_support.P1640utils) get_star() (in module pyklip.instruments.NIRC2) get_star_spectrum() (in module pyklip.spectra_management) ghstpeak_ratio (pyklip.instruments.MagAO.MagAOData attribute) GPIData (class in pyklip.instruments.GPI) guess_Dec_offset (pyklip.fitpsf.FMAstrometry attribute) (pyklip.fitpsf.PlanetEvidence attribute) guess_flux (pyklip.fitpsf.FitPSF attribute), [1] guess_pa (pyklip.fitpsf.FMAstrometry attribute) (pyklip.fitpsf.PlanetEvidence attribute) guess_RA_offset (pyklip.fitpsf.FMAstrometry attribute) (pyklip.fitpsf.PlanetEvidence attribute) guess_sep (pyklip.fitpsf.FMAstrometry attribute) (pyklip.fitpsf.PlanetEvidence attribute) guess_x (pyklip.fitpsf.FitPSF attribute) guess_y (pyklip.fitpsf.FitPSF attribute)

H

hat() (in module pyklip.kpp.utils.mathfunc) hdulist (pyklip.instruments.GPI.GPIData attribute)

high_pass_filter() (in module pyklip.klip) high_pass_filter_imgs() (in module pyklip.parallelized)

I

Ifs (class in pyklip.instruments.osiris) (class in pyklip.instruments.SPHERE) ifs_rdp (pyklip.instruments.SPHERE.Ifs attribute), [1] ifs_rotation (pyklip.instruments.CHARIS.CHARISData attribute) (pyklip.instruments.GPI.GPIData attribute) (pyklip.instruments.MagAO.MagAOData attribute) inject_disk() (in module pyklip.fakes) inject_planet() (in module pyklip.fakes) input (pyklip.instruments.CHARIS.CHARISData attribute), [1] (pyklip.instruments.GPI.GPIData attribute), [1] (pyklip.instruments.Instrument.Data attribute), [1] (pyklip.instruments.Instrument.GenericData attribute), [1] (pyklip.instruments.MagAO.MagAOData attribute), [1] (pyklip.instruments.NIRC2.NIRC2Data attribute), [1] (pyklip.instruments.SPHERE.Ifs attribute), [1] (pyklip.instruments.SPHERE.Irdis attribute), [1] (pyklip.instruments.osiris.Ifs attribute), [1]

invert_spect_fmodel() (in module pyklip.fmlib.extractSpec) Irdis (class in pyklip.instruments.SPHERE) isgoodpsf (pyklip.rdi.PSFLibrary attribute) ivars (pyklip.instruments.CHARIS.CHARISData attribute) IWA (pyklip.instruments.CHARIS.CHARISData attribute), [1] (pyklip.instruments.GPI.GPIData attribute), [1] (pyklip.instruments.Instrument.Data attribute), [1] (pyklip.instruments.Instrument.GenericData attribute), [1] (pyklip.instruments.MagAO.MagAOData attribute), [1] (pyklip.instruments.NIRC2.NIRC2Data attribute), [1] (pyklip.instruments.SPHERE.Ifs attribute), [1] (pyklip.instruments.SPHERE.Irdis attribute), [1] (pyklip.instruments.osiris.Ifs attribute), [1]

K

klip_dataset() (in module pyklip.fm) (in module pyklip.parallelized) klip_math() (in module pyklip.fm) (in module pyklip.klip)

klip_parallelized() (in module pyklip.fm) (in module pyklip.parallelized) klip_parallelized_lite() (in module pyklip.parallelized) klipparams (pyklip.instruments.Instrument.Data attribute) (pyklip.instruments.NIRC2.NIRC2Data attribute)

L

lenslet_scale (pyklip.instruments.CHARIS.CHARISData attribute) (pyklip.instruments.GPI.GPIData attribute) (pyklip.instruments.MagAO.MagAOData attribute) lenslet_scale_x (pyklip.instruments.CHARIS.CHARISData attribute) lenslet_scale_x_err (pyklip.instruments.CHARIS.CHARISData attribute) lenslet_scale_y (pyklip.instruments.CHARIS.CHARISData attribute) lenslet_scale_y_err (pyklip.instruments.CHARIS.CHARISData attribute)

lenslet_scales (pyklip.instruments.NIRC2.NIRC2Data attribute) lnlike() (in module pyklip.fitpsf) lnprior() (in module pyklip.fitpsf) lnprob() (in module pyklip.fitpsf) load_basis_files() (pyklip.fmlib.diskfm.DiskFM method) LSQ_gauss2d() (in module pyklip.fakes) LSQ_model_exp() (in module pyklip.kpp.utils.mathfunc) LSQ_scale_model_PSF() (in module pyklip.spectra_management)

M

MagAOData (class in pyklip.instruments.MagAO) make_corner_plot() (pyklip.fitpsf.FitPSF method) make_GOI_list() (in module pyklip.kpp.utils.oi) make_polar_coordinates() (in module pyklip.klip) make_spikemask() (in module pyklip.instruments.NIRC2) mask_known_objects() (in module pyklip.kpp.utils.oi) master_correlation (pyklip.rdi.PSFLibrary attribute) master_filenames (pyklip.rdi.PSFLibrary attribute) master_library (pyklip.rdi.PSFLibrary attribute)

master_wvs (pyklip.rdi.PSFLibrary attribute) MatchedFilter (class in pyklip.fmlib.matchedFilter) matern32() (in module pyklip.covars) meas_contrast() (in module pyklip.klip) measure_sat_spot_fluxes() (in module pyklip.instruments.GPI) measure_spot_over_star_ratio() (pyklip.instruments.CHARIS.CHARISData method) measure_star_flux() (in module pyklip.instruments.NIRC2) model_exp() (in module pyklip.kpp.utils.mathfunc) multifit() (pyklip.fitpsf.PlanetEvidence method)

N

nan_gaussian_filter() (in module pyklip.klip) nan_map_coordinates_2d() (in module pyklip.klip) nested_corner_plots() (pyklip.fitpsf.PlanetEvidence method) nfiles (pyklip.instruments.osiris.Ifs attribute) (pyklip.instruments.SPHERE.Ifs attribute) (pyklip.instruments.SPHERE.Irdis attribute) (pyklip.rdi.PSFLibrary attribute) NIRC2Data (class in pyklip.instruments.NIRC2) nMathar() (in module pyklip.instruments.utils.nair) nmf_math() (in module pyklip.nmf_imaging) NMFbff() (in module pyklip.nmf_imaging) NMFcomponents() (in module pyklip.nmf_imaging) NMFmodelling() (in module pyklip.nmf_imaging)

NMFsubtraction() (in module pyklip.nmf_imaging) NoDaemonPool (class in pyklip.kpp.utils.multiproc) NoDaemonProcess (class in pyklip.kpp.utils.multiproc) NoFM (class in pyklip.fmlib.nofm) noise_map (pyklip.fitpsf.FitPSF attribute) (pyklip.fitpsf.FMAstrometry attribute) (pyklip.fitpsf.PlanetEvidence attribute) np_calc_chisq() (in module pyklip.empca) nRoe() (in module pyklip.instruments.utils.nair) numwvs (pyklip.instruments.Instrument.Data attribute) nwvs (pyklip.instruments.osiris.Ifs attribute) (pyklip.instruments.SPHERE.Ifs attribute) (pyklip.instruments.SPHERE.Irdis attribute)

O

obs_latitude (pyklip.instruments.CHARIS.CHARISData attribute) obs_longitude (pyklip.instruments.CHARIS.CHARISData attribute) observatory_latitude (pyklip.instruments.GPI.GPIData attribute) (pyklip.instruments.MagAO.MagAOData attribute) (pyklip.instruments.NIRC2.NIRC2Data attribute) output (pyklip.instruments.CHARIS.CHARISData attribute), [1] (pyklip.instruments.GPI.GPIData attribute), [1] (pyklip.instruments.Instrument.Data attribute), [1] (pyklip.instruments.Instrument.GenericData attribute), [1] (pyklip.instruments.MagAO.MagAOData attribute), [1] (pyklip.instruments.NIRC2.NIRC2Data attribute), [1] (pyklip.instruments.SPHERE.Ifs attribute), [1] (pyklip.instruments.SPHERE.Irdis attribute), [1] (pyklip.instruments.osiris.Ifs attribute), [1]

output_centers (pyklip.instruments.Instrument.Data attribute) output_wcs (pyklip.instruments.Instrument.Data attribute) OWA (pyklip.instruments.CHARIS.CHARISData attribute), [1] (pyklip.instruments.Instrument.Data attribute) (pyklip.instruments.MagAO.MagAOData attribute) (pyklip.instruments.SPHERE.Irdis attribute), [1]

P

PA (pyklip.fitpsf.FMAstrometry attribute) (pyklip.fitpsf.PlanetEvidence attribute) package_directory (pyklip.instruments.GPI.GPIData attribute) (pyklip.instruments.MagAO.MagAOData attribute) (pyklip.instruments.NIRC2.NIRC2Data attribute) padding (pyklip.fitpsf.FitPSF attribute) (pyklip.fitpsf.FMAstrometry attribute) (pyklip.fitpsf.PlanetEvidence attribute) par_angle() (in module pyklip.instruments.NIRC2) ParamRange (class in pyklip.fitpsf) PAs (pyklip.instruments.CHARIS.CHARISData attribute), [1] (pyklip.instruments.GPI.GPIData attribute), [1] (pyklip.instruments.Instrument.Data attribute), [1] (pyklip.instruments.Instrument.GenericData attribute), [1] (pyklip.instruments.MagAO.MagAOData attribute), [1] (pyklip.instruments.NIRC2.NIRC2Data attribute), [1] (pyklip.instruments.SPHERE.Ifs attribute), [1] (pyklip.instruments.SPHERE.Irdis attribute), [1] (pyklip.instruments.osiris.Ifs attribute), [1] pertrurb_nospec() (in module pyklip.fm) perturb_nospec_modelsBased() (in module pyklip.fm) perturb_specIncluded() (in module pyklip.fm) pix2as() (in module pyklip.instruments.GPI) PlanetEvidence (class in pyklip.fitpsf) platescale (pyklip.instruments.SPHERE.Ifs attribute) (pyklip.instruments.SPHERE.Irdis attribute) point_source_detection() (in module pyklip.kpp.detection.detection) polyfit() (in module pyklip.instruments.utils.global_centroid) prepare_library() (pyklip.rdi.PSFLibrary method) prihdrs (pyklip.instruments.CHARIS.CHARISData attribute) (pyklip.instruments.GPI.GPIData attribute) (pyklip.instruments.MagAO.MagAOData attribute) (pyklip.instruments.SPHERE.Irdis attribute) Process (pyklip.kpp.utils.multiproc.NoDaemonPool attribute) profile_dir (pyklip.instruments.GPI.GPIData attribute) profile_filename (pyklip.instruments.GPI.GPIData attribute) propogate_errs() (pyklip.fitpsf.FMAstrometry method) psf_center (pyklip.instruments.osiris.Ifs attribute) (pyklip.instruments.SPHERE.Ifs attribute) (pyklip.instruments.SPHERE.Irdis attribute) PSFcubefit() (in module pyklip.fakes) PSFLibrary (class in pyklip.rdi) psfs (pyklip.instruments.osiris.Ifs attribute) (pyklip.instruments.SPHERE.Ifs attribute) (pyklip.instruments.SPHERE.Irdis attribute) pupil (pyklip.instruments.NIRC2.NIRC2Data attribute)

pupil_diam (pyklip.instruments.NIRC2.NIRC2Data attribute) pupils (pyklip.instruments.NIRC2.NIRC2Data attribute) pyklip (module) pyklip.covars (module) pyklip.empca (module) pyklip.fakes (module) pyklip.fitpsf (module) pyklip.fm (module) pyklip.fmlib (module) pyklip.fmlib.diskfm (module) pyklip.fmlib.extractSpec (module) pyklip.fmlib.fmpsf (module) pyklip.fmlib.matchedFilter (module) pyklip.fmlib.nofm (module) pyklip.instruments (module) pyklip.instruments.CHARIS (module) pyklip.instruments.GPI (module) pyklip.instruments.Instrument (module) pyklip.instruments.MagAO (module) pyklip.instruments.NIRC2 (module) pyklip.instruments.osiris (module) pyklip.instruments.P1640_support (module) pyklip.instruments.P1640_support.P1640utils (module) pyklip.instruments.SPHERE (module) pyklip.instruments.utils (module) pyklip.instruments.utils.global_centroid (module) pyklip.instruments.utils.nair (module) pyklip.instruments.utils.radonCenter (module) pyklip.klip (module) pyklip.kpp (module) pyklip.kpp.detection (module) pyklip.kpp.detection.detection (module) pyklip.kpp.metrics (module) pyklip.kpp.metrics.crossCorr (module) pyklip.kpp.metrics.matchedfilter (module) pyklip.kpp.stat (module) pyklip.kpp.stat.stat_utils (module) pyklip.kpp.stat.statPerPix_utils (module) pyklip.kpp.utils (module) pyklip.kpp.utils.GPIimage (module) pyklip.kpp.utils.mathfunc (module) pyklip.kpp.utils.multiproc (module) pyklip.kpp.utils.oi (module) pyklip.nmf_imaging (module) pyklip.parallelized (module) pyklip.rdi (module) pyklip.spectra_management (module)

Q

quick_psf_fit() (in module pyklip.fitpsf)

R

RA_offset (pyklip.fitpsf.FMAstrometry attribute) (pyklip.fitpsf.PlanetEvidence attribute) raw_Dec_offset (pyklip.fitpsf.FMAstrometry attribute) (pyklip.fitpsf.PlanetEvidence attribute) raw_flux (pyklip.fitpsf.FMAstrometry attribute) (pyklip.fitpsf.PlanetEvidence attribute) raw_PA (pyklip.fitpsf.FMAstrometry attribute) (pyklip.fitpsf.PlanetEvidence attribute) raw_RA_offset (pyklip.fitpsf.FMAstrometry attribute) (pyklip.fitpsf.PlanetEvidence attribute) raw_sep (pyklip.fitpsf.FMAstrometry attribute) (pyklip.fitpsf.PlanetEvidence attribute) readdata() (pyklip.instruments.CHARIS.CHARISData method), [1] (pyklip.instruments.GPI.GPIData method), [1] (pyklip.instruments.Instrument.Data method), [1] (pyklip.instruments.Instrument.GenericData method) (pyklip.instruments.MagAO.MagAOData method), [1] (pyklip.instruments.NIRC2.NIRC2Data method), [1] (pyklip.instruments.SPHERE.Ifs method) (pyklip.instruments.SPHERE.Irdis method) (pyklip.instruments.osiris.Ifs method)

recalculate_sat_spot_fluxes() (in module pyklip.instruments.GPI) recen() (in module pyklip.instruments.utils.global_centroid) ref_spot_contrast (pyklip.instruments.CHARIS.CHARISData attribute) ref_spot_contrast_error_fraction (pyklip.instruments.CHARIS.CHARISData attribute) ref_spot_contrast_gridamp (pyklip.instruments.CHARIS.CHARISData attribute) ref_spot_contrast_wv (pyklip.instruments.CHARIS.CHARISData attribute) rescale_wvs() (in module pyklip.instruments.GPI) retrieve_planet() (in module pyklip.fakes) retrieve_planet_flux() (in module pyklip.fakes) rotate() (in module pyklip.klip) rotate_imgs() (in module pyklip.parallelized) run() (pyklip.instruments.utils.global_centroid.Consumer method) run_matchedfilter() (in module pyklip.kpp.metrics.matchedfilter)

S

sampler (pyklip.fitpsf.FitPSF attribute) (pyklip.fitpsf.FMAstrometry attribute) (pyklip.fitpsf.PlanetEvidence attribute) samplingRegion() (in module pyklip.instruments.utils.radonCenter) saturation_pressure() (in module pyklip.instruments.utils.nair) save_correlation() (pyklip.rdi.PSFLibrary method) save_fmout() (pyklip.fmlib.diskfm.DiskFM method) (pyklip.fmlib.fmpsf.FMPlanetPSF method) (pyklip.fmlib.matchedFilter.MatchedFilter method) (pyklip.fmlib.nofm.NoFM method) save_kl_basis() (pyklip.fmlib.diskfm.DiskFM method) save_platecal_cubes() (pyklip.instruments.CHARIS.CHARISData method) savedata() (pyklip.instruments.CHARIS.CHARISData method), [1] (pyklip.instruments.GPI.GPIData method), [1] (pyklip.instruments.Instrument.Data method) (pyklip.instruments.Instrument.Data static method) (pyklip.instruments.Instrument.GenericData method) (pyklip.instruments.MagAO.MagAOData method), [1] (pyklip.instruments.NIRC2.NIRC2Data method), [1] (pyklip.instruments.SPHERE.Ifs method) (pyklip.instruments.SPHERE.Irdis method) (pyklip.instruments.osiris.Ifs method) searchCenter() (in module pyklip.instruments.utils.radonCenter)

sep (pyklip.fitpsf.FMAstrometry attribute) (pyklip.fitpsf.PlanetEvidence attribute) seps (pyklip.instruments.GPI.GPIData attribute) set_bounds() (pyklip.fitpsf.FitPSF method) set_kernel() (pyklip.fitpsf.FitPSF method) set_pixel_weights() (in module pyklip.empca) set_zeros_to_nan() (in module pyklip.instruments.P1640_support.P1640utils) skip_section() (pyklip.fmlib.matchedFilter.MatchedFilter method) (pyklip.fmlib.nofm.NoFM method) smoothCostFunction() (in module pyklip.instruments.utils.radonCenter) specphotcal() (in module pyklip.instruments.utils.global_centroid) spectral_collapse() (pyklip.instruments.GPI.GPIData method) (pyklip.instruments.Instrument.Data method) spot_flux (pyklip.instruments.CHARIS.CHARISData attribute) (pyklip.instruments.GPI.GPIData attribute) (pyklip.instruments.MagAO.MagAOData attribute) spot_ratio (pyklip.instruments.CHARIS.CHARISData attribute) (pyklip.instruments.GPI.GPIData attribute) spot_ratio2 (pyklip.instruments.GPI.GPIData attribute) spot_ratio_h (pyklip.instruments.GPI.GPIData attribute) spot_ratio_h2 (pyklip.instruments.GPI.GPIData attribute) sq_exp() (in module pyklip.covars) subtract_satspots() (in module pyklip.instruments.GPI)

T

table_to_TableHDU() (in module pyklip.instruments.P1640_support.P1640utils)

Task (class in pyklip.instruments.utils.global_centroid) throughputs (pyklip.instruments.GPI.GPIData attribute)

U

update_disk() (pyklip.fmlib.diskfm.DiskFM method)

update_input_cubes() (pyklip.instruments.CHARIS.CHARISData method)

W

wavelengths (pyklip.instruments.SPHERE.Irdis attribute) wcs (pyklip.instruments.CHARIS.CHARISData attribute), [1] (pyklip.instruments.GPI.GPIData attribute), [1] (pyklip.instruments.Instrument.Data attribute), [1] (pyklip.instruments.Instrument.GenericData attribute), [1] (pyklip.instruments.MagAO.MagAOData attribute), [1] (pyklip.instruments.NIRC2.NIRC2Data attribute), [1] (pyklip.instruments.SPHERE.Ifs attribute) (pyklip.instruments.SPHERE.Irdis attribute) (pyklip.instruments.osiris.Ifs attribute) weighted_empca() (in module pyklip.empca)

wv_indices (pyklip.instruments.CHARIS.CHARISData attribute) (pyklip.instruments.GPI.GPIData attribute) wvs (pyklip.instruments.CHARIS.CHARISData attribute), [1] (pyklip.instruments.GPI.GPIData attribute), [1] (pyklip.instruments.Instrument.Data attribute), [1] (pyklip.instruments.Instrument.GenericData attribute), [1] (pyklip.instruments.MagAO.MagAOData attribute), [1] (pyklip.instruments.NIRC2.NIRC2Data attribute), [1] (pyklip.instruments.SPHERE.Ifs attribute), [1] (pyklip.instruments.SPHERE.Irdis attribute), [1] (pyklip.instruments.osiris.Ifs attribute), [1]